Bioconductor Counting RNA-seq

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Rsubread counting RNA-seq

updated 3.8 years ago by Yang Liao ▴ 450 • written 5.5 years ago by Christian Mertes • 0

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Comment: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene by Wolfgang RAFFELSBERGER ▴ 140

Yes, rtools4.4 is installed (and works for making my own packages)

Comment: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene by Wolfgang RAFFELSBERGER ▴ 140

Thank you, this solved the problem !

Comment: Problem installing package TxDb.Mmusculus.UCSC.mm10.knownGene by ATpoint ★ 4.7k

I cannot reproduce this on Windows 11. Is rtools installed to allow compilation from source on Windows?

Comment: Conumee with EPICv2 Segment function by zpingfeng • 0

I have the same issue too for the analysis lack of sample replicates. It was fine for the samples with replicates

Comment: Complex contrasts for between and within subject comparisons by wuwenhui2 • 0

@gordonsmyth Dear Dr. Smyth, in this design, I am interested to extract genes that have different expression profile at any of the time poi…

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